Dear Svensmolders
This problems is linked to the type of boundary condition. In you case, you impose a water level varying in time (on a large boundary), and this problem occur when the level rise (some water is entering in the model).
In those conditions, the velocities are free, that's why you could obtain locally such important values.
The origin of the problem is related to some inconsistencies between a constant water level imposed on the boundary and the propagation inside your model.
Sometimes it works without any problem (like in your case with manning 0.025) and sometimes it crash. In the second test it may indicate that the imposed water level is inconsistent with this friction value...
For such problem, one solution is to prescribe also the velocities and using Thompson method at the boundaries or to prescribe water level varying in space (in accordance with the internal propagation).
If you seaside boundary is large, the best solution is to extract the boundary condition from a large model (But that means you should have such large model or buy such boundaries conditions ...)
Where is your estuary?
Christophe