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TOPIC: hermes error when used by telapy for parsing SERAFIN file

hermes error when used by telapy for parsing SERAFIN file 1 year 10 months ago #40584

huangziyi2017
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Fresh Boarder
Posts: 17
Thank you received: 2

Hi,

error occurs as using hermes for analyzing serafin file:

_hermes.error is related to b'SERAFIN '
Traceback (most recent call last):
File "/home/huang/opentelemac-mascaret/main/scripts/python3/driven_coupling.py", line 81, in <module>
the_coupling(driven_run)
File "/home/huang/opentelemac-mascaret/main/scripts/python3/telapy/coupling/long_cpl_driver.py", line 456, in __call__
self.preparation_model()
File "/home/huang/opentelemac-mascaret/main/scripts/python3/telapy/coupling/long_cpl_driver.py", line 287, in preparation_model
res = TelemacFile('T2DPRE')
File "/home/huang/opentelemac-mascaret/main/scripts/python3/data_manip/extraction/telemac_file.py", line 56, in __init__
HermesFile.__init__(self, file_name,
File "/home/huang/opentelemac-mascaret/main/scripts/python3/telapy/api/hermes.py", line 151, in __init__
HermesFile._hermes.open_mesh(self._fformat,
_hermes.error: try_pyarr_from_string failed

On CentOS 7 system; compilation env is gcc/gfortran-9.3.1; mpi env is OpenMPI-4.1.4; python env is Python-3.9.13.

The configuration file is attached.

Attachments:

systel-mai...7-05.cfg (1KB)

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hermes error when used by telapy for parsing SERAFIN file 1 year 3 months ago #41979

JACOB_Chen OFFLINE Fresh Boarder Posts: 1	Hi, Has this question already been solved ? This error also occured on my computer . My system is Ubuntu 20.04, intel fortran compiler and mpich2 is used. zpchen
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hermes error when used by telapy for parsing SERAFIN file 1 year 2 months ago #42186

huangziyi2017 OFFLINE Fresh Boarder Posts: 17 Thank you received: 2	Not yet. I removed the compiled _hermes.so api, and use the Python class SerafinFile instead.
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hermes error when used by telapy for parsing SERAFIN file 4 months 1 week ago #43894

CAMERI_Shai OFFLINE Junior Boarder Posts: 46 Thank you received: 4	hi huang, did you apply changes to all python scripts? if so, can you share, please? I'm dealing the same problem. Shai
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hermes error when used by telapy for parsing SERAFIN file 4 months 1 week ago #43937

huangziyi2017 OFFLINE Fresh Boarder Posts: 17 Thank you received: 2	Up to v8p4, I use Python class SerafinFile, rather than hermes.
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hermes error when used by telapy for parsing SERAFIN file 4 months 1 week ago #43938

huangziyi2017 OFFLINE Fresh Boarder Posts: 17 Thank you received: 2	The changes that I applied are issues of numpy dtype "np.int" in "data_manip.formats.serafin_file" and "data_manip.extraction.telemac_file", which raise errors because it's been not supported by Numpy.
	The administrator has disabled public write access. The following user(s) said Thank You: CAMERI_Shai

hermes error when used by telapy for parsing SERAFIN file 4 months 1 week ago #43939

nicogodet NOW ONLINE Senior Boarder Posts: 128 Thank you received: 31	It should be fixed in V8P5 gitlab.pam-retd.fr/otm/telemac-mascaret/...1bf33321dd78a0445856
	The administrator has disabled public write access. The following user(s) said Thank You: huangziyi2017

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